2KI6	Protein Transport	date	Apr 28, 2009
title	The Fgf1-S100a13-C2a Hetero-Hexameric Complex Structure: A C In The Non-Classical Pathway For Fgf1 Secretion
authors	S.M.Krishna, S.G.Rani, C.Yu
compound		source
Molecule: Synaptotagmin-1 Chain: A, F Fragment: C2a Domain Synonym: Synaptotagmin I, Syti, P65 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Syt1, Svp65, Syt Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector: Pet(20) Other_details: Purified From Heparin Affinity Column
Molecule: Heparin-Binding Growth Factor 1 Chain: B, E Synonym: Hbgf-1, Acidic Fibroblast Growth Factor, Afgf, Bet Endothelial Cell Growth Factor, Ecgf-Beta; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Fgf1, Fgfa Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector: Pgex Other_details: Purified From Gst Column
Molecule: Protein S100-A13 Chain: C Synonym: S100 Calcium-Binding Protein A13 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: S100a13 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector: Pgex Other_details: Purified From Gst Column
Molecule: Protein S100-A13 Chain: D Synonym: S100 Calcium-Binding Protein A13 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: S100a13 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector: Pgex Other_details: Purified From Gst Column
method	Solution NMR
ligand	DLY	enzyme
Gene Ontology	Chain Function Process Component D, C E, B F, A
Primary reference	The heterohexameric complex structure, a component in the non-classical pathway for fibroblast growth factor 1 (FGF1) secretion., Mohan SK, Rani SG, Yu C, J Biol Chem. 2010 May 14;285(20):15464-75. Epub 2010 Mar 10. PMID:20220137

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (3750 Kb) [Save to disk] Biological Unit Coordinates (2ki6.pdb1.gz) 211 Kb LPC: Ligand-Protein Contacts for 2KI6 CSU: Contacts of Structural Units for 2KI6 Original NMR restraints for 2KI6 from PDB Retrieve 2KI6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2KI6 from S2C, [Save to disk]

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Visual 3D analysis of 2KI6

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2KI6, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ki6_E] [2ki6_F] [2ki6_D] [2ki6_A] [2ki6_B] [2ki6] [2ki6_C] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 2KI6: [C2] [FGF] [S_100 ] by SMART

Other resources with information on 2KI6

Community annotation for 2KI6 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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