2KLC Structural Genomics, Unknown Function date Jun 30, 2009
title Nmr Solution Structure Of Human Ubiquitin-Like Domain Of Ubi Northeast Structural Genomics Consortium (Nesg) Target Ht5a
authors R.S.Doherty, S.Dhe-Paganon, C.Fares, S.Lemak, A.Gutmanas, M.Garci G.T.Montelione, C.H.Arrowsmith, Northeast Structural Genomics Consortium (Nesg), Structural Genomics Consortium (Sgc), Onta Centre For Structural Proteomics (Ocsp)
compound source
Molecule: Ubiquilin-1
Chain: A
Fragment: Ubiquitin-Like Domain: Residues 34-112
Synonym: Protein Linking Iap With Cytoskeleton 1, Plic-1, H
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Da41, Plic1, Ubqln1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: P15tv Lic
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (438 Kb) [Save to disk]
  • Biological Unit Coordinates (2klc.pdb1.gz) 23 Kb
  • CSU: Contacts of Structural Units for 2KLC
  • Original NMR restraints for 2KLC from PDB
  • Retrieve 2KLC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KLC from S2C, [Save to disk]
    • View 2KLC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KLC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KLC, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2klc_A] [2klc]
  • SWISS-PROT database: [Q9UMX0]
  • Domain organization of [UBQL1_HUMAN] by SWISSPFAM
  • Domain found in 2KLC: [UBQ ] by SMART
    • Other resources with information on 2KLC
  • Community annotation for 2KLC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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