2KLY Ligase date Jul 10, 2009
title Solution Structure Of Human Ubiquitin Conjugating Enzyme Ube2g2
authors T.Ju, W.Bocik, A.Majumdar, J.R.Tolman
compound source
Molecule: Ubiquitin-Conjugating Enzyme E2 G2
Chain: A
Synonym: Ubiquitin-Protein Ligase G2, Ubiquitin Carrier Protein G2;
Ec: 6.3.2.19
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ube2g2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector: Pet28b
methodSolution NMR
ligand
enzyme Ligase E.C.6.3.2.19 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure and dynamics of human ubiquitin conjugating enzyme Ube2g2., Ju T, Bocik W, Majumdar A, Tolman JR, Proteins. 2010 Apr;78(5):1291-301. PMID:20014027
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (432 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2KLY
  • Original NMR restraints for 2KLY from PDB
  • Retrieve 2KLY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KLY from S2C, [Save to disk]
  • View 2KLY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2KLY
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2KLY, from MSDmotif at EBI
  • Fold representative 2kly from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kly] [2kly_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2KLY: [UBCc ] by SMART
  • Other resources with information on 2KLY
  • Community annotation for 2KLY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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