2KN6 Apoptosis date Aug 16, 2009
title Structure Of Full-Length Human Asc (Apoptosis-Associated Spe Protein Containing A Card)
authors E.De Alba
compound source
Molecule: Apoptosis-Associated Speck-Like Protein Containin
Chain: A
Synonym: Hasc, Pyd And Card Domain-Containing Protein, Targ Methylation-Induced Silencing 1, Caspase Recruitment Domain Containing Protein 5;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Asc, Card5, Pycard, Tms1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Plys
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
methodSolution NMR

Primary referenceStructure and interdomain dynamics of apoptosis-associated speck-like protein containing a card (ASC)., de Alba E, J Biol Chem. 2009 Sep 15. PMID:19759015
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1027 Kb) [Save to disk]
  • Biological Unit Coordinates (2kn6.pdb1.gz) 52 Kb
  • CSU: Contacts of Structural Units for 2KN6
  • Original NMR restraints for 2KN6 from PDB
  • Retrieve 2KN6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KN6 from S2C, [Save to disk]
  • View 2KN6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2KN6
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2KN6, from MSDmotif at EBI
  • Fold representative 2kn6 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kn6_A] [2kn6]
  • SWISS-PROT database: [Q9ULZ3]
  • Domain organization of [ASC_HUMAN] by SWISSPFAM
  • Domain found in 2KN6: [PYRIN ] by SMART
  • Other resources with information on 2KN6
  • Community annotation for 2KN6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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