2KNE Metal Transport date Aug 21, 2009
title Calmodulin Wraps Around Its Binding Domain In The Plasma Mem Pump Anchored By A Novel 18-1 Motif
authors N.Juranic, E.Atanasova, A.G.Filoteo, S.Macura, F.G.Prendergast, J.T.Penniston, E.E.Strehler
compound source
Molecule: Calmodulin
Chain: A
Synonym: Cam
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Strain: Bl21(De3)-Plyss
Gene: Calm, Calm1, Calm2, Calm3, Calml2, Cam, Cam1, Cam2, C Camb, Camc, Camiii;
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21
Expression_system_variant: De3
Expression_system_vector: Pet-15b

Molecule: Atpase, Ca++ Transporting, Plasma Membrane 4
Chain: B
Fragment: Unp Residues 1086-1113, C28
Engineered: Yes
Other_details: Calmodulin Binding Domain Of Pmca C-Tail

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Strain: Bl21(De3)
Gene: Atp2b4, Hcg_18445, Rp11-397p13.1-001
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21
Expression_system_variant: De3
Expression_system_vector: Pet-15b
methodSolution NMR
ligand CA enzyme
note 2KNE is a representative structure
Gene HCG
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceCalmodulin wraps around its binding domain in the plasma membrane Ca2+ pump anchored by a novel 18-1 motif., Juranic N, Atanasova E, Filoteo AG, Macura S, Prendergast FG, Penniston JT, Strehler EE, J Biol Chem. 2009 Dec 7. PMID:19996092
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (910 Kb) [Save to disk]
  • Biological Unit Coordinates (2kne.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 2KNE
  • CSU: Contacts of Structural Units for 2KNE
  • Original NMR restraints for 2KNE from PDB
  • Retrieve 2KNE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KNE from S2C, [Save to disk]
  • View 2KNE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2KNE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KNE, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kne] [2kne_B] [2kne_A]
  • SWISS-PROT database: [P23634] [P62158]
  • Belongs to the p-type atpase (p-atpase) superfamily according to TCDB.
  • Belongs to the calmodulin calcium binding protein (calmodulin) family according to TCDB.
  • Domain organization of [AT2B4_HUMAN] [CALM_HUMAN] by SWISSPFAM
  • Domain found in 2KNE: [EFh ] by SMART
  • Other resources with information on 2KNE
  • Community annotation for 2KNE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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