2KOY Metal Transport date Oct 03, 2009
title Structure Of The E1064a Mutant Of The N-Domain Of Wilson Dis Associated Protein
authors O.Y.Dmitriev
compound source
Molecule: Copper-Transporting Atpase 2
Chain: A
Fragment: N-Domain
Synonym: Copper Pump 2, Wilson Disease-Associated Protein, Kda;
Ec: 3.6.3.4
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Atp7b, Pwd, Wc1, Wnd
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector: Ptyb12
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.6.3.4 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (819 Kb) [Save to disk]
  • Biological Unit Coordinates (2koy.pdb1.gz) 42 Kb
  • CSU: Contacts of Structural Units for 2KOY
  • Original NMR restraints for 2KOY from PDB
  • Retrieve 2KOY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KOY from S2C, [Save to disk]
  • View 2KOY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2KOY
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2KOY, from MSDmotif at EBI
  • Fold representative 2koy from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2koy] [2koy_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Alignments of the sequence of 2KOY with the sequences similar proteins can be viewed for 2KOY's classification at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification at ProtoMap. Click on the Cluster number.
  • Other resources with information on 2KOY
  • Community annotation for 2KOY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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