2KR6 Hydrolase date Dec 04, 2009
title Solution Structure Of Presenilin-1 Ctf Subunit
authors V.Doetsch
compound source
Molecule: Presenilin-1
Chain: A
Fragment: Presenilin-1 Ctf Subunit, Unp Residues 292-467
Synonym: Ps-1, Protein S182
Ec: 3.4.23.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ad3, Ps1, Psen1, Psnl1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pet21a
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.4.23 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (917 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2KR6
  • Original NMR restraints for 2KR6 from PDB
  • Retrieve 2KR6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KR6 from S2C, [Save to disk]
  • View 2KR6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2KR6
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2KR6, from MSDmotif at EBI
  • Fold representative 2kr6 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kr6] [2kr6_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Alignments of the sequence of 2KR6 with the sequences similar proteins can be viewed for 2KR6's classification at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification at ProtoMap. Click on the Cluster number.
  • Other resources with information on 2KR6
  • Community annotation for 2KR6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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