2KSW Hydrolase Inhibitor date Jan 14, 2010
title Backbone 1h, 13c, And 15n Chemical Shift Assignments For Ory
authors S.Horita, J.Ishibashi, K.Nagata, T.Miyakawa, M.Yamakawa, M.Tanoku
compound source
Molecule: Oryctin
Chain: A
Fragment: Unp Residues 20-85
Engineered: Yes
 Organism_scientific: Oryctes Rhinoceros
Organism_common: Coconut Rhinoceros Beetle
Organism_taxid: 72550
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet32a
methodSolution NMR
note 2KSW is a representative structure
Primary referenceIsolation, cDNA cloning, and structure-based functional characterization of oryctin, a hemolymph protein from the coconut rhinoceros beetle, Oryctes rhinoceros, as a novel serine protease inhibitor., Horita S, Ishibashi J, Nagata K, Miyakawa T, Yamakawa M, Tanokura M, J Biol Chem. 2010 Sep 24;285(39):30150-8. Epub 2010 Jul 14. PMID:20630859
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (382 Kb) [Save to disk]
  • Biological Unit Coordinates (2ksw.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 2KSW
  • Original NMR restraints for 2KSW from PDB
  • Retrieve 2KSW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KSW from S2C, [Save to disk]
    • View 2KSW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KSW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KSW, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ksw_A] [2ksw]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2KSW
  • Community annotation for 2KSW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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