OCA Atlas for 2KUL

2KUL

Transferase

date

Feb 19, 2010

title

Solution Structure Of Human Vaccinia Related Kinase 1(Vrk1)

authors

J.Shin, H.Yoon

compound

source

Molecule: Serinethreonine-Protein Kinase Vrk1
Chain: A
Fragment: Residues 1-360
Synonym: Vaccinia-Related Kinase 1
Ec: 2.7.11.1
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Vrk1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet29b

method

Solution NMR

ligand

enzyme

Transferase E.C.2.7.11.1 BRENDA

Gene
Ontology

Chain	Function	Process	Component
A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2222 Kb) [Save to disk]

Biological Unit Coordinates (2kul.pdb1.gz) 112 Kb

CSU: Contacts of Structural Units for 2KUL

Original NMR restraints for 2KUL from PDB

Retrieve 2KUL in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2KUL from S2C, [Save to disk]

View 2KUL in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2KUL

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

3D motif for 2KUL, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2kul] [2kul_A]

SWISS-PROT database:

Domain organization of by SWISSPFAM

Domain found in 2KUL: [STYKc ] by SMART

Other resources with information on 2KUL

Community annotation for 2KUL at PDBWiki (http://pdbwiki.org)

MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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