2KUM Signaling Protein date Feb 22, 2010
title Solution Structure Of The Human Chemokine Ccl27
authors J.P.Kirkpatrick, A.Jansma, A.Hsu, T.M.Handel, D.Nietlispach
compound source
Molecule: C-C Motif Chemokine 27
Chain: A
Synonym: Small-Inducible Cytokine A27, Cc Chemokine Ilc, Il Alpha-Locus Chemokine, Skinkine, Eskine, Cutaneous T-Cell-A Chemokine, Ctack;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Alp, Ccl27, Ctack, Ctak, Eskine, Ilc, Pesky, Scya27
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3) Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Phue
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A
  • chemokine activity


    • Primary referenceNMR analysis of the structure, dynamics, and unique oligomerization properties of the human chemokine CTACK/CCL27., Jansma AL, Kirkpatrick JP, Hsu AR, Handel TM, Nietlispach D, J Biol Chem. 2010 Mar 3. PMID:20200157
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (720 Kb) [Save to disk]
  • Biological Unit Coordinates (2kum.pdb1.gz) 24 Kb
  • CSU: Contacts of Structural Units for 2KUM
  • Original NMR restraints for 2KUM from PDB
  • Retrieve 2KUM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KUM from S2C, [Save to disk]
    • View 2KUM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KUM
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KUM, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kum_A] [2kum]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2KUM: [SCY ] by SMART
    • Other resources with information on 2KUM
  • Community annotation for 2KUM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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