2KUN Membrane Protein date Feb 23, 2010
title Three Dimensional Structure Of Huprp(90-231 M129 Q212p)
authors G.Ilc, G.Giachin, M.Jaremko, L.Jaremko, I.Zhukov, J.Plavec, G.Legn F.Benetti
compound source
Molecule: Major Prion Protein
Chain: A
Fragment: Unp Residues 90-231
Synonym: Prp, Prp27-30, Prp33-35c, Ascr
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Prnp, Prip, Prp
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet-11a
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNMR structure of the human prion protein with the pathological Q212P mutation reveals unique structural features., Ilc G, Giachin G, Jaremko M, Jaremko L, Benetti F, Plavec J, Zhukov I, Legname G, PLoS One. 2010 Jul 22;5(7):e11715. PMID:20661422
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (758 Kb) [Save to disk]
  • Biological Unit Coordinates (2kun.pdb1.gz) 39 Kb
  • CSU: Contacts of Structural Units for 2KUN
  • Original NMR restraints for 2KUN from PDB
  • Retrieve 2KUN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KUN from S2C, [Save to disk]
    • View 2KUN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KUN
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KUN, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kun_A] [2kun]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2KUN: [PRP ] by SMART
    • Other resources with information on 2KUN
  • Community annotation for 2KUN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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