2KV5 Toxin date Mar 08, 2010
title Solution Structure Of The Par Toxin Fst In Dpc Micelles
authors K.Zangger, C.Gobl, S.Kosol, H.M.Ruckert
compound source
Molecule: Putative Uncharacterized Protein Rnai
Chain: A
Synonym: Fst
Engineered: Yes
Synthetic: Yes
Organism_scientific: Enterococcus Faecalis
Organism_taxid: 1351
Other_details: Synthesized By Fmoc-Based Solid-Phase Peptid Synthesis
methodSolution NMR
note 2KV5 is a representative structure
Primary referenceSolution structure and membrane binding of the toxin fst of the par addiction module., Gobl C, Kosol S, Stockner T, Ruckert HM, Zangger K, Biochemistry. 2010 Aug 10;49(31):6567-75. PMID:20677831
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (183 Kb) [Save to disk]
  • Biological Unit Coordinates (2kv5.pdb1.gz) 9 Kb
  • CSU: Contacts of Structural Units for 2KV5
  • Original NMR restraints for 2KV5 from PDB
  • Retrieve 2KV5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KV5 from S2C, [Save to disk]
  • View 2KV5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2KV5
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2KV5, from MSDmotif at EBI
  • Fold representative 2kv5 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kv5] [2kv5_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2KV5
  • Community annotation for 2KV5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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