2KWF Transcription date Apr 08, 2010
title The Structure Of E-Protein Activation Domain 1 Bound To The Of Cbpp300 Elucidates Leukemia Induction By E2a-Pbx1
authors C.M.Denis, S.Chitayat, M.J.Plevin, S.Liu, H.L.Spencer, M.Ikura, D. S.P.Smith
compound source
Molecule: Creb-Binding Protein
Chain: A
Fragment: Unp Residues 587-673, Kix Domain
Ec: 2.3.1.48
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Crebbp, Cbp
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pet21a(+)

Molecule: Transcription Factor 4
Chain: B
Fragment: Unp Residues 11-27
Synonym: Tcf-4, Immunoglobulin Transcription Factor 2, Itf- Enhancer Factor 2, Sef-2, Class B Basic Helix-Loop-Helix Pr Bhlhb19;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tcf4, Bhlhb19, Itf2, Sef2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pgex-4t1
methodSolution NMR
ligand
enzyme Transferase E.C.2.3.1.48 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (584 Kb) [Save to disk]
  • Biological Unit Coordinates (2kwf.pdb1.gz) 30 Kb
  • CSU: Contacts of Structural Units for 2KWF
  • Original NMR restraints for 2KWF from PDB
  • Retrieve 2KWF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KWF from S2C, [Save to disk]
  • View 2KWF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2KWF
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2KWF, from MSDmotif at EBI
  • Fold representative 2kwf from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kwf_A] [2kwf] [2kwf_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Alignments of the sequence of 2KWF with the sequences similar proteins can be viewed for 2KWF's classification at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification at ProtoMap. Click on the Cluster number.
  • Other resources with information on 2KWF
  • Community annotation for 2KWF at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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