2KXC Protein Binding date Apr 30, 2010
title 1h, 13c, And 15n Chemical Shift Assignments For Irtks-Sh3 An R47 Complex
authors O.Aitio, M.Hellman, A.Kazlauskas, D.F.Vingadassalom, J.M.Leong, K P.Permi
compound source
Molecule: Brain-Specific Angiogenesis Inhibitor 1-Associate 2-Like Protein 1;
Chain: A
Fragment: Irtks-Sh3 Domain, Unp Residues 339-402
Synonym: Bai1-Associated Protein 2-Like Protein 1, Insulin Tyrosine Kinase Substrate;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Baiap2l1, Irtks
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Vector
Expression_system_vector: Pet15b

Molecule: Espf-Like Protein
Chain: B
Fragment: Espfu-R47 Domain, Unp Residues 268-314
Synonym: Tir-Cytoskeleton Coupling Protein
Engineered: Yes

Organism_scientific: Escherichia Coli
Organism_taxid: 83334
Strain: O157:H7
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Vector
Expression_system_vector: Pet15b
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceRecognition of tandem PxxP motifs as a unique Src homology 3-binding mode triggers pathogen-driven actin assembly., Aitio O, Hellman M, Kazlauskas A, Vingadassalom DF, Leong JM, Saksela K, Permi P, Proc Natl Acad Sci U S A. 2010 Dec 14;107(50):21743-8. Epub 2010 Nov 22. PMID:21098279
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (448 Kb) [Save to disk]
  • Biological Unit Coordinates (2kxc.pdb1.gz) 23 Kb
  • CSU: Contacts of Structural Units for 2KXC
  • Original NMR restraints for 2KXC from PDB
  • Retrieve 2KXC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KXC from S2C, [Save to disk]
  • View 2KXC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2KXC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KXC, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kxc_B] [2kxc_A] [2kxc]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2KXC: [SH3 ] by SMART
  • Other resources with information on 2KXC
  • Community annotation for 2KXC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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