2KXN Rna Binding Protein Rna date May 10, 2010
title Nmr Structure Of Human Tra2beta1 Rrm In Complex With Aagaac
authors A.Clery, S.Jayne, N.Benderska, C.Dominguez, S.Stamm, F.H.T.Allai
compound source
Molecule: 5'-R(Apapgpapapc)-3'
Chain: A
Engineered: Yes
Synthetic: Yes

Molecule: Transformer-2 Protein Homolog Beta
Chain: B
Fragment: Rrm Domain, Residues 106-200
Synonym: Tra-2 Beta, Tra2-Beta, Htra2-Beta, Transformer-2 P Homolog B, Splicing Factor, Arginineserine-Rich 10;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tra2b, Sfrs10
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceMolecular basis of purine-rich RNA recognition by the human SR-like protein Tra2-beta1., Clery A, Jayne S, Benderska N, Dominguez C, Stamm S, Allain FH, Nat Struct Mol Biol. 2011 Apr;18(4):443-50. Epub 2011 Mar 13. PMID:21399644
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (350 Kb) [Save to disk]
  • Biological Unit Coordinates (2kxn.pdb1.gz) 30 Kb
  • CSU: Contacts of Structural Units for 2KXN
  • Original NMR restraints for 2KXN from PDB
  • Retrieve 2KXN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KXN from S2C, [Save to disk]
  • View 2KXN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2KXN
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KXN, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kxn_B] [2kxn_A] [2kxn]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2KXN: [RRM ] by SMART
  • Other resources with information on 2KXN
  • Community annotation for 2KXN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science