2L03 Neuropeptide date Jun 30, 2010
title Spatial Structure Of Water-Soluble Lynx1
authors K.S.Mineev, Z.O.Shenkarev, A.S.Arseniev
compound source
Molecule: Ly-6neurotoxin-Like Protein 1
Chain: A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Lynx1
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector: Pet-22b
methodSolution NMR
note 2L03 is a representative structure
Primary referenceNMR structure and action on nicotinic acetylcholine receptors of water-soluble domain of human LYNX1., Lyukmanova EN, Shenkarev ZO, Shulepko MA, Mineev KS, D'Hoedt D, Kasheverov IE, Filkin SY, Krivolapova AP, Janickova H, Dolezal V, Dolgikh DA, Arseniev AS, Bertrand D, Tsetlin VI, Kirpichnikov MP, J Biol Chem. 2011 Mar 25;286(12):10618-27. Epub 2011 Jan 20. PMID:21252236
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (429 Kb) [Save to disk]
  • Biological Unit Coordinates (2l03.pdb1.gz) 22 Kb
  • CSU: Contacts of Structural Units for 2L03
  • Original NMR restraints for 2L03 from PDB
  • Retrieve 2L03 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2L03 from S2C, [Save to disk]
  • View 2L03 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2L03
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2L03, from MSDmotif at EBI
  • Fold representative 2l03 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2l03_A] [2l03]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2L03: [LU ] by SMART
  • Other resources with information on 2L03
  • Community annotation for 2L03 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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