2L0E Membrane Protein date Jul 01, 2010
title Structural And Functional Analysis Of Tm Vi Of The Nhe1 Isof Na+H+ Exchanger
authors J.Tzeng, B.L.Lee, B.D.Sykes, L.Fliegel
compound source
Molecule: Sodiumhydrogen Exchanger 1
Chain: A
Fragment: Transmembrane Segment Vi Of Nhe1, Unp Residues 22
Synonym: Na(+)H(+) Exchanger 1, Nhe-1, Solute Carrier Fami Member 1, Na(+)H(+) Antiporter, Amiloride-Sensitive, Apnh;
Engineered: Yes
Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: Transmembrane Segment Vi Of Nhe1, Unp Residu 250
methodSolution NMR
ligand ACE, NH2 enzyme
note 2L0E is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and functional analysis of transmembrane VI of the NHE1 isoform of the Na+/H+ exchanger., Tzeng J, Lee BL, Sykes BD, Fliegel L, J Biol Chem. 2010 Sep 15. PMID:20843797
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (350 Kb) [Save to disk]
  • Biological Unit Coordinates (2l0e.pdb1.gz) 9 Kb
  • LPC: Ligand-Protein Contacts for 2L0E
  • CSU: Contacts of Structural Units for 2L0E
  • Original NMR restraints for 2L0E from PDB
  • Retrieve 2L0E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2L0E from S2C, [Save to disk]
  • View 2L0E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2L0E
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2L0E, from MSDmotif at EBI
  • Fold representative 2l0e from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2l0e] [2l0e_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2L0E
  • Community annotation for 2L0E at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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