2L0F Solution NMR structure of human polymerase iota UBM2 (P692A mutant) in complex with ubiquitin date
authors Cui, G., Benirschke, R., Mer, G.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceStructural Basis of Ubiquitin Recognition by Translesion Synthesis DNA Polymerase iota, Cui G, Benirschke RC, Tuan HF, Juranic N, Macura S, Botuyan MV, Mer G, Biochemistry. 2010 Nov 30;49(47):10198-10207. Epub 2010 Nov 4. PMID:21049971
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (643 Kb) [Save to disk]
  • Biological Unit Coordinates (2l0f.pdb1.gz) 33 Kb
  • CSU: Contacts of Structural Units for 2L0F
  • Original NMR restraints for 2L0F from PDB
  • Retrieve 2L0F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2L0F from S2C, [Save to disk]
  • View 2L0F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2L0F
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2L0F, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2l0f] [2l0f_B] [2l0f_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2L0F: [UBQ ] by SMART
  • Other resources with information on 2L0F
  • Community annotation for 2L0F at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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