2L0S Blood Clotting date Jul 15, 2010
title Solution Structure Of Human Plasminogen Kringle 3
authors M.T.Christen, P.Frank, J.Schaller, M.Llinas
compound source
Molecule: Plasminogen
Chain: A
Fragment: Unp Residues 272-354, Kringle 3 Domain
Ec: 3.4.21.7
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Plg
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: M15
Expression_system_vector: Pqe-8
Other_details: Expressed In 15n-Labeled M9 Minimal Medium
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.4.21.7 BRENDA
Primary referenceHuman Plasminogen Kringle 3: Solution Structure, Functional Insights, Phylogenetic Landscape., Christen MT, Frank P, Schaller J, Llinas M, Biochemistry. 2010 Jul 9. PMID:20617841
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (434 Kb) [Save to disk]
  • Biological Unit Coordinates (2l0s.pdb1.gz) 23 Kb
  • CSU: Contacts of Structural Units for 2L0S
  • Original NMR restraints for 2L0S from PDB
  • Retrieve 2L0S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2L0S from S2C, [Save to disk]
  • View 2L0S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2L0S
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2L0S, from MSDmotif at EBI
  • Fold representative 2l0s from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2l0s_A] [2l0s]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2L0S: [KR ] by SMART
  • Other resources with information on 2L0S
  • Community annotation for 2L0S at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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