2L23 Transcription date Aug 10, 2010
title Nmr Structure Of The Acid (Activator Interacting Domain) Of Mediator Med25 Protein
authors F.Bontems, D.Monte, F.Dewitte, V.Villeret
compound source
Molecule: Mediator Of Rna Polymerase II Transcription Subun
Chain: A
Fragment: Acid Domain, Unp Residues 391-548
Synonym: Mediator Complex Subunit 25, Activator-Recruited C Kda Component, Arc92, Activator Interaction Domain-Containi 1, P78;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Acid1, Arc92, Med25, Ptov2, Tcbap0758
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet
methodSolution NMR
Primary referenceNMR structure of the human Mediator MED25 ACID domain., Bontems F, Verger A, Dewitte F, Lens Z, Baert JL, Ferreira E, Launoit YD, Sizun C, Guittet E, Villeret V, Monte D, J Struct Biol. 2010 Oct 23. PMID:20974256
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1019 Kb) [Save to disk]
  • Biological Unit Coordinates (2l23.pdb1.gz) 52 Kb
  • CSU: Contacts of Structural Units for 2L23
  • Original NMR restraints for 2L23 from PDB
  • Retrieve 2L23 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2L23 from S2C, [Save to disk]
  • View 2L23 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2L23
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2L23, from MSDmotif at EBI
  • Fold representative 2l23 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2l23_A] [2l23]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2L23
  • Community annotation for 2L23 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science