2L29 Transport Protein date Aug 13, 2010
title Complex Structure Of E4 Mutant Human Igf2r Domain 11 Bound T
authors C.Williams, H.Hoppe, D.Rezgui, M.Strickland, S.Frago, R.Z.Ellis, P Amorn, S.N.Prince, O.J.Zaccheo, B.Forbes, E.Y.Jones, M.P.Crump, A
compound source
Molecule: Insulin-Like Growth Factor 2 Receptor Variant
Chain: A
Fragment: Domain 11, Residues 1431-1570
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet26a

Molecule: Insulin-Like Growth Factor II
Chain: B
Fragment: Residues 25-91
Synonym: Igf-II, Somatomedin-A, Insulin-Like Growth Factor Del, Preptin;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Igf2, Pp1446
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jm101
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgem-Teasy
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceAn exon splice enhancer primes IGF2:IGF2R binding site structure and function evolution., Williams C, Hoppe HJ, Rezgui D, Strickland M, Forbes BE, Grutzner F, Frago S, Ellis RZ, Wattana-Amorn P, Prince SN, Zaccheo OJ, Nolan CM, Mungall AJ, Jones EY, Crump MP, Hassan AB, Science. 2012 Nov 30;338(6111):1209-13. doi: 10.1126/science.1228633. PMID:23197533
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1184 Kb) [Save to disk]
  • Biological Unit Coordinates (2l29.pdb1.gz) 60 Kb
  • CSU: Contacts of Structural Units for 2L29
  • Original NMR restraints for 2L29 from PDB
  • Retrieve 2L29 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2L29 from S2C, [Save to disk]
  • View 2L29 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2L29
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2L29, from MSDmotif at EBI
  • Fold representative 2l29 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2l29_A] [2l29] [2l29_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2L29: [IlGF ] by SMART
  • Other resources with information on 2L29
  • Community annotation for 2L29 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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