2L2I Transcription date Aug 18, 2010
title Nmr Structure Of The Complex Between The Tfb1 Subunit Of Tfi Activation Domain Of Eklf
authors C.Mas, P.Di Lello, J.Lafrance-Vanasse, J.G.Omichinski
compound source
Molecule: Rna Polymerase II Transcription Factor B Subunit
Chain: A
Fragment: Ph Domain (Unp Residues 2-115)
Synonym: General Transcription And Dna Repair Factor Iih Su Tfb1, Tfiih Subunit Tfb1, Rna Polymerase II Transcription F Kda Subunit, Rna Polymerase II Transcription Factor B P73 S
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae S288c
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c
Gene: D9740.3, Tfb1, Ydr311w
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Topp2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-2tk

Molecule: Krueppel-Like Factor 1
Chain: B
Fragment: Transactivation Domain (Unp Residues 51-90)
Synonym: Erythroid Krueppel-Like Transcription Factor, Eklf
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Eklf, Klf1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Topp2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-2tk
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (737 Kb) [Save to disk]
  • Biological Unit Coordinates (2l2i.pdb1.gz) 38 Kb
  • CSU: Contacts of Structural Units for 2L2I
  • Original NMR restraints for 2L2I from PDB
  • Retrieve 2L2I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2L2I from S2C, [Save to disk]
  • View 2L2I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2L2I
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2L2I, from MSDmotif at EBI
  • Fold representative 2l2i from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2l2i_B] [2l2i] [2l2i_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2L2I
  • Community annotation for 2L2I at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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