2L3Y Transcription date Sep 25, 2010
title Solution Structure Of Mouse Il-6
authors V.Veverka, N.T.Redpath, B.Carrington, F.W.Muskett, R.J.Taylor, A. M.D.Carr
compound source
Molecule: Interleukin-6
Chain: A
Fragment: Unp Residues 27-211
Synonym: Il-6, Interleukin Hp-1, B-Cell Hybridoma Growth Fa
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Il6, Il-6
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pet-21
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceConservation of functional sites on interleukin-6 and implications for evolution of signaling complex assembly and therapeutic intervention., Veverka V, Baker T, Redpath NT, Carrington B, Muskett FW, Taylor RJ, Lawson AD, Henry AJ, Carr MD, J Biol Chem. 2012 Nov 16;287(47):40043-50. doi: 10.1074/jbc.M112.405597. Epub, 2012 Oct 1. PMID:23027872
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2614 Kb) [Save to disk]
  • Biological Unit Coordinates (2l3y.pdb1.gz) 51 Kb
  • CSU: Contacts of Structural Units for 2L3Y
  • Original NMR restraints for 2L3Y from PDB
  • Retrieve 2L3Y in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2L3Y from S2C, [Save to disk]
  • View 2L3Y in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2L3Y
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2L3Y, from MSDmotif at EBI
  • Fold representative 2l3y from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2l3y_A] [2l3y]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2L3Y: [IL6 ] by SMART
  • Other resources with information on 2L3Y
  • Community annotation for 2L3Y at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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