2L4H Metal Binding Protein date Oct 06, 2010
title The Solution Structure Of Calcium Bound Cib1
authors H.Huang, H.J.Vogel
compound source
Molecule: Calcium And Integrin-Binding Protein 1
Chain: A
Synonym: Cib, Calcium- And Integrin-Binding Protein, Cibp, Dna-Pkcs-Interacting Protein, Kinase-Interacting Protein, K Interacting Protein 2-28, Sip2-28;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cib1, Cib, Kip, Prkdcip
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet19b
methodSolution NMR
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • calcium-dependent protein ki...
  • protein serine/threonine kin...


  • Primary referenceThe solution structures of Ca2+- CIB1 and Mg2+-CIB1 and their interactions with the platelet integrin {alpha}IIb cytoplasmic domain., Huang H, Ishida H, Yamniuk AP, Vogel HJ, J Biol Chem. 2011 Mar 9. PMID:21388953
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (543 Kb) [Save to disk]
  • Biological Unit Coordinates (2l4h.pdb1.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 2L4H
  • CSU: Contacts of Structural Units for 2L4H
  • Original NMR restraints for 2L4H from PDB
  • Retrieve 2L4H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2L4H from S2C, [Save to disk]
  • View 2L4H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2L4H
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2L4H, from MSDmotif at EBI
  • Fold representative 2l4h from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2l4h_A] [2l4h]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2L4H: [EFh ] by SMART
  • Other resources with information on 2L4H
  • Community annotation for 2L4H at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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