2L4Z Hydrolase, Metal Binding Protein date Oct 22, 2010
title Nmr Structure Of Fusion Of Ctip (641-685) To Lmo4-Lim1 (18-8
authors C.Liew, P.H.Stokes, A.H.Kwan, J.M.Matthews
compound source
Molecule: Dna Endonuclease Rbbp8,Lim Domain Transcription F Lmo4;
Chain: A
Synonym: Ctbp-Interacting Protein,Ctip,Retinoblastoma-Bindi 8,Rbbp-8,Retinoblastoma-Interacting Protein And Myosin-Like Sporulation In The Absence Of Spo11 Protein 2 Homolog,Sae2, Tumor Autoantigen,Lim Domain Only Protein 4,Lmo-4;
Ec: 3.1.-.-
Engineered: Yes
Mutation: Yes
Other_details: The Fusion Protein Of Ctip (Unp 641-685), Li 911) And Lmo4 (Unp 18-82)
Organism_scientific: Homo Sapiens, Mus Musculus
Organism_common: Human, Mouse
Organism_taxid: 9606, 10090
Gene: Rbbp8, Ctip, Lmo4
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Vector
Expression_system_vector: Pgex-2t
methodSolution NMR
ligand ZN enzyme Hydrolase E.C.3.1 BRENDA
Primary referenceStructural Basis of the Interaction of the Breast Cancer Oncogene LMO4 with the Tumour Suppressor CtIP/RBBP8., Stokes PH, Liew CW, Kwan AH, Foo P, Barker HE, Djamirze A, O'Reilly V, Visvader JE, Mackay JP, Matthews JM, J Mol Biol. 2013 Apr 12;425(7):1101-10. doi: 10.1016/j.jmb.2013.01.017. Epub 2013, Jan 23. PMID:23353824
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (579 Kb) [Save to disk]
  • Biological Unit Coordinates (2l4z.pdb1.gz) 30 Kb
  • LPC: Ligand-Protein Contacts for 2L4Z
  • CSU: Contacts of Structural Units for 2L4Z
  • Original NMR restraints for 2L4Z from PDB
  • Retrieve 2L4Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2L4Z from S2C, [Save to disk]
  • View 2L4Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2L4Z
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2L4Z, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2l4z] [2l4z_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2L4Z: [LIM ] by SMART
  • Other resources with information on 2L4Z
  • Community annotation for 2L4Z at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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