2L5V Protein Binding date Nov 08, 2010
title Solution Structure Of The C-Terminal Domain Of Hrpn13
authors Z.Zhou, H.Hu
compound source
Molecule: Proteasomal Ubiquitin Receptor Adrm1
Chain: A
Fragment: C-Terminal Domain
Synonym: 110 Kda Cell Membrane Glycoprotein, Gp110, Adhesio Regulating Molecule 1, Arm-1, Proteasome Regulatory Particl Atpase 13, Hrpn13, Rpn13 Homolog;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Adrm1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet-Mg
methodSolution NMR

Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (822 Kb) [Save to disk]
  • Biological Unit Coordinates (2l5v.pdb1.gz) 41 Kb
  • CSU: Contacts of Structural Units for 2L5V
  • Original NMR restraints for 2L5V from PDB
  • Retrieve 2L5V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2L5V from S2C, [Save to disk]
  • View 2L5V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2L5V
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2L5V, from MSDmotif at EBI
  • Fold representative 2l5v from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2l5v_A] [2l5v]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2L5V
  • Community annotation for 2L5V at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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