2L60 Hormone date Nov 11, 2010
title A Novel Design Concept: New Y-Receptor Agonists With Increas Membrane Recruitment, Y2 Affinity And Selectivity
authors N.L.Pedersen, S.Jurt, O.Zerbe, K.J.Jensen
compound source
Molecule: Peptide Yy
Chain: A
Fragment: Unp Residues 41-64
Synonym: Pyy, Pyy-I, Peptide Tyrosine Tyrosine, Peptide Yy( Pyy-II;
Engineered: Yes
Synthetic: Yes
methodSolution NMR
ligand NH2 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (242 Kb) [Save to disk]
  • Biological Unit Coordinates (2l60.pdb1.gz) 12 Kb
  • LPC: Ligand-Protein Contacts for 2L60
  • CSU: Contacts of Structural Units for 2L60
  • Original NMR restraints for 2L60 from PDB
  • Retrieve 2L60 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2L60 from S2C, [Save to disk]
  • View 2L60 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2L60
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2L60, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2l60] [2l60_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2L60: [PAH ] by SMART
  • Other resources with information on 2L60
  • Community annotation for 2L60 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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