2L7B Lipid Transport date Dec 07, 2010
title Nmr Structure Of Full Length Apoe3
authors J.Chen, J.Wang
compound source
Molecule: Apolipoprotein E
Chain: A
Synonym: Apo-E
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Apoe
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pet30a
methodSolution NMR
subcellular loc. Membrane localization by OPM: Secreted
out side
in side
Gene
Ontology
ChainFunctionProcessComponent
A
  • positive regulation of nitri...

  • Primary referenceTopology of human apolipoprotein E3 uniquely regulates its diverse biological functions., Chen J, Li Q, Wang J, Proc Natl Acad Sci U S A. 2011 Sep 6;108(36):14813-8. Epub 2011 Aug 22. PMID:21873229
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1865 Kb) [Save to disk]
  • Biological Unit Coordinates (2l7b.pdb1.gz) 94 Kb
  • CSU: Contacts of Structural Units for 2L7B
  • Original NMR restraints for 2L7B from PDB
  • Retrieve 2L7B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2L7B from S2C, [Save to disk]
  • View 2L7B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2L7B
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2L7B, from MSDmotif at EBI
  • Fold representative 2l7b from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2l7b] [2l7b_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Alignments of the sequence of 2L7B with the sequences similar proteins can be viewed for 2L7B's classification at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification at ProtoMap. Click on the Cluster number.
  • Other resources with information on 2L7B
  • Community annotation for 2L7B at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science