2L8S Cell Adhesion date Jan 24, 2011
title Solution Nmr Structure Of Transmembrane And Cytosolic Region Integrin Alpha1 In Detergent Micelles
authors C.Lai, X.Liu, C.Tian
compound source
Molecule: Integrin Alpha-1
Chain: A
Fragment: Transmembranecytoplasmic Region, Unp Residues 11
Synonym: Integrin Alpha1, Cd49 Antigen-Like Family Member A And Collagen Receptor, Vla-1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet21b
methodSolution NMR
Primary referenceIntegrin alpha1 Has a Long Helix, Extending from the Transmembrane Region to the Cytoplasmic Tail in Detergent Micelles., Lai C, Liu X, Tian C, Wu F, PLoS One. 2013 Apr 30;8(4):e62954. doi: 10.1371/journal.pone.0062954. Print 2013. PMID:23646163
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk]
  • Biological Unit Coordinates (2l8s.pdb1.gz) 13 Kb
  • CSU: Contacts of Structural Units for 2L8S
  • Original NMR restraints for 2L8S from PDB
  • Retrieve 2L8S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2L8S from S2C, [Save to disk]
  • View 2L8S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2L8S
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2L8S, from MSDmotif at EBI
  • Fold representative 2l8s from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2l8s_A] [2l8s]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2L8S
  • Community annotation for 2L8S at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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