2L9U Membrane Protein date Feb 24, 2011
title Spatial Structure Of Dimeric Erbb3 Transmembrane Domain
authors K.S.Mineev, A.S.Arseniev
compound source
Molecule: Receptor Tyrosine-Protein Kinase Erbb-3
Chain: A, B
Fragment: Unp Residues 640-670
Synonym: Proto-Oncogene-Like Protein C-Erbb-3, Tyrosine Kin Cell Surface Receptor Her3;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Erbb3, Her3
Expression_system: Cell-Free Synthesis
Expression_system_vector_type: Vector
Expression_system_vector: Pet-22b
methodSolution NMR
enzyme Transferase E.C. BRENDA
Primary referenceSpatial structure and dimer--monomer equilibrium of the ErbB3 transmembrane domain in DPC micelles., Mineev KS, Khabibullina NF, Lyukmanova EN, Dolgikh DA, Kirpichnikov MP, Arseniev AS, Biochim Biophys Acta. 2011 Aug;1808(8):2081-8. doi: 10.1016/j.bbamem.2011.04.017., Epub 2011 May 6. PMID:21575594
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (519 Kb) [Save to disk]
  • Biological Unit Coordinates (2l9u.pdb1.gz) 26 Kb
  • CSU: Contacts of Structural Units for 2L9U
  • Original NMR restraints for 2L9U from PDB
  • Retrieve 2L9U in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2L9U from S2C, [Save to disk]
  • View 2L9U in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2L9U
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2L9U, from MSDmotif at EBI
  • Fold representative 2l9u from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2l9u_B] [2l9u] [2l9u_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2L9U
  • Community annotation for 2L9U at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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