2L9U Membrane Protein date Feb 24, 2011
title Spatial Structure Of Dimeric Erbb3 Transmembrane Domain
authors K.S.Mineev, A.S.Arseniev
compound source
Molecule: Receptor Tyrosine-Protein Kinase Erbb-3
Chain: A, B
Fragment: Unp Residues 640-670
Synonym: Proto-Oncogene-Like Protein C-Erbb-3, Tyrosine Kin Cell Surface Receptor Her3;
Ec: 2.7.10.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Erbb3, Her3
Expression_system: Cell-Free Synthesis
Expression_system_vector_type: Vector
Expression_system_vector: Pet-22b
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.10.1 BRENDA
subcellular loc. Membrane localization by OPM: Eukaryotic plasma membrane
extracellular side
cytoplasmic side
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (519 Kb) [Save to disk]
  • Biological Unit Coordinates (2l9u.pdb1.gz) 26 Kb
  • CSU: Contacts of Structural Units for 2L9U
  • Original NMR restraints for 2L9U from PDB
  • Retrieve 2L9U in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2L9U from S2C, [Save to disk]
  • View 2L9U in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2L9U
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2L9U, from MSDmotif at EBI
  • Fold representative 2l9u from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2l9u_B] [2l9u] [2l9u_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Alignments of the sequence of 2L9U with the sequences similar proteins can be viewed for 2L9U's classification at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification at ProtoMap. Click on the Cluster number.
  • Other resources with information on 2L9U
  • Community annotation for 2L9U at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science