2LBC solution structure of tandem UBA of USP13 date
authors Zhang, Y., Zhou, C., Zhou, Z., Song, A., Hu, H.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceDomain analysis reveals that a deubiquitinating enzyme USP13 performs non-activating catalysis for Lys63-linked polyubiquitin., Zhang YH, Zhou CJ, Zhou ZR, Song AX, Hu HY, PLoS One. 2011;6(12):e29362. Epub 2011 Dec 28. PMID:22216260
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (520 Kb) [Save to disk]
  • Biological Unit Coordinates (2lbc.pdb1.gz) 35 Kb
  • CSU: Contacts of Structural Units for 2LBC
  • Original NMR restraints for 2LBC from PDB
  • Retrieve 2LBC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LBC from S2C, [Save to disk]
    • View 2LBC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2LBC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2LBC, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2lbc_A] [2lbc]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2LBC: [UBA ] by SMART
    • Other resources with information on 2LBC
  • Community annotation for 2LBC at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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