2LGY Ubiquitin-like domain from HOIL-1 date
authors Beasley, S.A., Shaw, G.S.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceSolution structure of the E3 ligase HOIL-1 Ubl domain., Beasley SA, Safadi SS, Barber KR, Shaw GS, Protein Sci. 2012 Jul;21(7):1085-92. doi: 10.1002/pro.2080. Epub 2012 May 24. PMID:22517668
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (560 Kb) [Save to disk]
  • Biological Unit Coordinates (2lgy.pdb1.gz) 29 Kb
  • CSU: Contacts of Structural Units for 2LGY
  • Original NMR restraints for 2LGY from PDB
  • Retrieve 2LGY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LGY from S2C, [Save to disk]
    • View 2LGY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2LGY
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2LGY, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2lgy_A] [2lgy]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2LGY
  • Community annotation for 2LGY at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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