2LK4 Transferase date Oct 04, 2011
title Structural And Mechanistic Insights Into The Interaction Bet Pyk2 And Paxillin Ld Motif
authors M.Vanarotti, D.Miller, C.Guibao, J.Zheng
compound source
Molecule: Protein-Tyrosine Kinase 2-Beta
Chain: A
Fragment: Focal Adhesion Targeting (Fat) Region Residues 87
Synonym: Calcium-Dependent Tyrosine Kinase, Cadtk, Cell Adh Kinase Beta, Cak-Beta, Focal Adhesion Kinase 2, Fadk 2, Pro Tyrosine Kinase 2, Related Adhesion Focal Tyrosine Kinase,
Ec: 2.7.10.2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ptk2b, Fak2, Pyk2, Raftk
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pet28
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and mechanistic insights into the interaction between Pyk2 and Paxillin LD motifs., Vanarotti MS, Miller DJ, Guibao CD, Nourse A, Zheng JJ, J Mol Biol. 2014 Aug 28. pii: S0022-2836(14)00457-4. doi:, 10.1016/j.jmb.2014.08.014. PMID:25174335
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (833 Kb) [Save to disk]
  • Biological Unit Coordinates (2lk4.pdb1.gz) 42 Kb
  • CSU: Contacts of Structural Units for 2LK4
  • Original NMR restraints for 2LK4 from PDB
  • Retrieve 2LK4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LK4 from S2C, [Save to disk]
  • View 2LK4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2LK4
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2LK4, from MSDmotif at EBI
  • Fold representative 2lk4 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2lk4] [2lk4_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2LK4
  • Community annotation for 2LK4 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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