2LKN Protein Binding date Oct 17, 2011
title Solution Structure Of The Ppiase Domain Of Human Aryl-Hydroc Receptor-Interacting Protein (Aip)
authors M.Linnert, Y.Lin, A.Manns, K.Haupt, A.Paschke, G.Fischer, M.Weiwad
compound source
Molecule: Ah Receptor-Interacting Protein
Chain: A
Fragment: Ppiase Fkbp-Type Domain Containing Residues 1-166
Synonym: Aip, Aryl-Hydrocarbon Receptor-Interacting Protein Associated Protein 2, Xap-2, Immunophilin Homolog Ara9, Fkb
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Aip, Xap2
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector: Pet30a
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe FKBP-Type Domain of the Human Aryl Hydrocarbon Receptor-Interacting Protein Reveals an Unusual Hsp90 Interaction., Linnert M, Lin YJ, Manns A, Haupt K, Paschke AK, Fischer G, Weiwad M, Lucke C, Biochemistry. 2013 Mar 13. PMID:23418784
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (876 Kb) [Save to disk]
  • Biological Unit Coordinates (2lkn.pdb1.gz) 45 Kb
  • CSU: Contacts of Structural Units for 2LKN
  • Original NMR restraints for 2LKN from PDB
  • Retrieve 2LKN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LKN from S2C, [Save to disk]
  • View 2LKN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2LKN
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2LKN, from MSDmotif at EBI
  • Fold representative 2lkn from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2lkn] [2lkn_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Alignments of the sequence of 2LKN with the sequences similar proteins can be viewed for 2LKN's classification at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification at ProtoMap. Click on the Cluster number.
  • Other resources with information on 2LKN
  • Community annotation for 2LKN at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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