2LLD Antimicrobial Protein date Nov 07, 2011
title The Insect Defensin Lucifensin From Lucilia Sericata
authors M.K.E.Nygaard, A.S.Andersen, H.Kristensen, K.A.Krogfelt, P.Fojan
compound source
Molecule: Lucifensin
Chain: A
Engineered: Yes
 Organism_scientific: Lucilia Sericata
Organism_common: Green Bottle Fly
Organism_taxid: 13632
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21
Expression_system_variant: De3
Expression_system_vector: Pet32a(+)
methodSolution NMR
note 2LLD is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe insect defensin lucifensin from Lucilia sericata., Nygaard MK, Andersen AS, Kristensen HH, Krogfelt KA, Fojan P, Wimmer R, J Biomol NMR. 2012 Mar;52(3):277-82. PMID:22322867
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (183 Kb) [Save to disk]
  • Biological Unit Coordinates (2lld.pdb1.gz) 9 Kb
  • CSU: Contacts of Structural Units for 2LLD
  • Original NMR restraints for 2LLD from PDB
  • Retrieve 2LLD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LLD from S2C, [Save to disk]
    • View 2LLD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2LLD
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2LLD, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2lld] [2lld_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2LLD: [Knot1 ] by SMART
    • Other resources with information on 2LLD
  • Community annotation for 2LLD at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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