2LO4 Protein Transport date Jan 12, 2012
title Nmr Solution Structure Of Optineurin Zinc-Finger Domain
authors R.C.Wilson, J.Wolfsberger, P.D.Twigg
compound source
Molecule: Optineurin
Chain: A
Synonym: E3-14.7k-Interacting Protein, Fip-2, Huntingtin Ye Partner L, Huntingtin-Interacting Protein 7, Hip-7, Hunting Interacting Protein L, Nemo-Related Protein, Optic Neuropat Inducing Protein, Transcription Factor Iiia-Interacting Pro Tfiiia-Intp;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Optn, Fip2, Glc1e, Hip7, Hypl, Nrp
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21de3
Expression_system_vector: Pet28b
methodSolution NMR
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (2lo4.pdb1.gz) 8 Kb
  • LPC: Ligand-Protein Contacts for 2LO4
  • CSU: Contacts of Structural Units for 2LO4
  • Original NMR restraints for 2LO4 from PDB
  • Retrieve 2LO4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LO4 from S2C, [Save to disk]
  • View 2LO4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2LO4
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2LO4, from MSDmotif at EBI
  • Fold representative 2lo4 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2lo4] [2lo4_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2LO4
  • Community annotation for 2LO4 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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