2LOP Membrane Protein date Jan 26, 2012
title Backbone Structure Of Human Membrane Protein Tmem14a
authors C.Eichmann, C.Klammt, I.Maslennikov, W.Kwiatkowski, R.Riek, S.Cho
compound source
Molecule: Transmembrane Protein 14a
Chain: A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tmem14a, C6orf73, Ptd011
Expression_system: Cell-Free Synthesis
Expression_system_vector: P23-Gwn
methodSolution NMR
subcellular loc. Membrane localization by OPM: Mitochondrial inner membrane
intermembrane space side
matrix space side

Primary referenceFacile backbone structure determination of human membrane proteins by NMR spectroscopy., Klammt C, Maslennikov I, Bayrhuber M, Eichmann C, Vajpai N, Chiu EJ, Blain KY, Esquivies L, Kwon JH, Balana B, Pieper U, Sali A, Slesinger PA, Kwiatkowski W, Riek R, Choe S, Nat Methods. 2012 May 20;9(8):834-9. doi: 10.1038/nmeth.2033. PMID:22609626
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (525 Kb) [Save to disk]
  • Biological Unit Coordinates (2lop.pdb1.gz) 27 Kb
  • CSU: Contacts of Structural Units for 2LOP
  • Original NMR restraints for 2LOP from PDB
  • Retrieve 2LOP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LOP from S2C, [Save to disk]
  • View 2LOP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2LOP
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2LOP, from MSDmotif at EBI
  • Fold representative 2lop from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2lop] [2lop_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2LOP
  • Community annotation for 2LOP at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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