2LP2 Solution structure and dynamics of human S100A1 protein modified at cysteine 85 with homocysteine disulfide bond formation in calcium saturated form date
authors Nowakowski, M.E., Jaremko, L., Jaremko, M., Zdanowski, K., Ejchart, A.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, HCS enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceImpact of calcium binding and thionylation of S100A1 protein on its nuclear magnetic resonance-derived structure and backbone dynamics., Nowakowski M, Ruszczynska-Bartnik K, Budzinska M, Jaremko L, Jaremko M, Zdanowski K, Bierzynski A, Ejchart A, Biochemistry. 2013 Feb 19;52(7):1149-59. doi: 10.1021/bi3015407. Epub 2013 Feb 7. PMID:23351007
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (940 Kb) [Save to disk]
  • Biological Unit Coordinates (2lp2.pdb1.gz) 48 Kb
  • LPC: Ligand-Protein Contacts for 2LP2
  • CSU: Contacts of Structural Units for 2LP2
  • Original NMR restraints for 2LP2 from PDB
  • Retrieve 2LP2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LP2 from S2C, [Save to disk]
  • View 2LP2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2LP2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2LP2, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2lp2] [2lp2_B] [2lp2_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2LP2: [S_100 ] by SMART
  • Other resources with information on 2LP2
  • Community annotation for 2LP2 at PDBWiki (http://pdbwiki.org)

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