2LSR Structural Protein Cell Adhesion date May 04, 2012
title Solution Structure Of Harmonin N Terminal Domain In Complex Exon68 Encoded Peptide Of Cadherin23
authors L.Pan, L.Wu, C.Zhang, M.Zhang
compound source
Molecule: Harmonin
Chain: A
Synonym: Antigen Ny-Co-38ny-Co-37, Autoimmune Enteropathy- Antigen Aie-75, Protein Pdz-73, Renal Carcinoma Antigen Ny- Usher Syndrome Type-1c Protein;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Aie75, Ush1c
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Vector
Expression_system_vector: Pet32a

Molecule: Peptide From Cadherin-23
Chain: B
Fragment: Exon68 Encoded Peptide
Engineered: Yes
Mutation: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cdh23, Ush1d
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Vector
Expression_system_vector: Pet32a
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (550 Kb) [Save to disk]
  • Biological Unit Coordinates (2lsr.pdb1.gz) 28 Kb
  • CSU: Contacts of Structural Units for 2LSR
  • Original NMR restraints for 2LSR from PDB
  • Retrieve 2LSR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LSR from S2C, [Save to disk]
  • View 2LSR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2LSR
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2LSR, from MSDmotif at EBI
  • Fold representative 2lsr from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2lsr_B] [2lsr] [2lsr_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Alignments of the sequence of 2LSR with the sequences similar proteins can be viewed for 2LSR's classification at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification at ProtoMap. Click on the Cluster number.
  • Other resources with information on 2LSR
  • Community annotation for 2LSR at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science