2LTB Unknown Function date May 16, 2012
title Wild-Type Fas1-4
authors J.Underhaug, N.Nielsen, K.Runager
compound source
Molecule: Transforming Growth Factor-Beta-Induced Protein I
Chain: A
Fragment: Fas1 4 Domain
Synonym: Beta Ig-H3, Kerato-Epithelin, Rgd-Containing Colla Associated Protein, Rgd-Cap;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tgfbi, Bigh3
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet Sumo
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMutation in transforming growth factor beta induced protein associated with granular corneal dystrophy type 1 reduces the proteolytic susceptibility through local structural stabilization., Underhaug J, Koldso H, Runager K, Nielsen JT, Sorensen CS, Kristensen T, Otzen DE, Karring H, Malmendal A, Schiott B, Enghild JJ, Nielsen NC, Biochim Biophys Acta. 2013 Oct 12. pii: S1570-9639(13)00366-X. doi:, 10.1016/j.bbapap.2013.10.008. PMID:24129074
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (348 Kb) [Save to disk]
  • Biological Unit Coordinates (2ltb.pdb1.gz) 35 Kb
  • CSU: Contacts of Structural Units for 2LTB
  • Original NMR restraints for 2LTB from PDB
  • Retrieve 2LTB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LTB from S2C, [Save to disk]
  • View 2LTB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2LTB
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2LTB, from MSDmotif at EBI
  • Fold representative 2ltb from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ltb] [2ltb_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2LTB: [FAS1 ] by SMART
  • Other resources with information on 2LTB
  • Community annotation for 2LTB at PDBWiki (http://pdbwiki.org)

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