2LV7 Metal Binding Protein date Jun 29, 2012
title Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
authors H.V.Mccue, P.Patel, A.P.Herbert, L.Lian, R.D.Burgoyne, L.P.Haynes
compound source
Molecule: Calcium-Binding Protein 7
Chain: A
Fragment: N-Terminal Residues 1-100
Synonym: Cabp7, Calneuron II, Calneuron-2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cabp7, Caln2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pe-Sumo Vector, T7, Kan
methodSolution NMR
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution NMR Structure of the Ca2+-bound N-terminal Domain of CaBP7: A REGULATOR OF GOLGI TRAFFICKING., McCue HV, Patel P, Herbert AP, Lian LY, Burgoyne RD, Haynes LP, J Biol Chem. 2012 Nov 2;287(45):38231-43. doi: 10.1074/jbc.M112.402289. Epub 2012, Sep 18. PMID:22989873
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (531 Kb) [Save to disk]
  • Biological Unit Coordinates (2lv7.pdb1.gz) 27 Kb
  • LPC: Ligand-Protein Contacts for 2LV7
  • CSU: Contacts of Structural Units for 2LV7
  • Original NMR restraints for 2LV7 from PDB
  • Retrieve 2LV7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LV7 from S2C, [Save to disk]
  • View 2LV7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2LV7
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2LV7, from MSDmotif at EBI
  • Fold representative 2lv7 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2lv7] [2lv7_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2LV7: [EFh ] by SMART
  • Other resources with information on 2LV7
  • Community annotation for 2LV7 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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