2LVZ Solution structure of a Eosinophil Cationic Protein-trisaccharide heparin mimetic complex date
authors Mayoral, M.Garcia., Canales, A., Diaz, D., Prados, J.Lopez., Moussaoui, M., Paz, J.de., Angulo, J., Nieto, P., Barbero, J.Jimenez., Boix, E., Bruix, M.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand IDS, LVZ, SGN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • nuclease activity
  • endonuclease activity
  • ribonuclease activity


    • Primary referenceInsights into the glycosaminoglycan-mediated cytotoxic mechanism of eosinophil cationic protein revealed by NMR., Garcia-Mayoral MF, Canales A, Diaz D, Lopez-Prados J, Moussaoui M, de Paz JL, Angulo J, Nieto PM, Jimenez-Barbero J, Boix E, Bruix M, ACS Chem Biol. 2013 Jan 18;8(1):144-51. doi: 10.1021/cb300386v. Epub 2012 Oct 9. PMID:23025322
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (742 Kb) [Save to disk]
  • Biological Unit Coordinates (2lvz.pdb1.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 2LVZ
  • CSU: Contacts of Structural Units for 2LVZ
  • Original NMR restraints for 2LVZ from PDB
  • Retrieve 2LVZ in mmCIF format [Save to disk]
    • View 2LVZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2LVZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2LVZ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2lvz] [2lvz_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2LVZ: [RNAse_Pc ] by SMART
    • Other resources with information on 2LVZ
  • Community annotation for 2LVZ at PDBWiki (http://pdbwiki.org)

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