2M17 ubiquitin-like domain-containing C-terminal domain phosphatase (UBLCP1) date
authors Lee, W., Yun, J.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NH2 enzyme
Primary referenceSolution Structure and Rpn1 Interaction of the UBL Domain of Human RNA Polymerase II C-Terminal Domain Phosphatase., Yun JH, Ko S, Lee CK, Cheong HK, Cheong C, Yoon JB, Lee W, PLoS One. 2013 May 7;8(5):e62981. doi: 10.1371/journal.pone.0062981. Print 2013. PMID:23667555
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (503 Kb) [Save to disk]
  • Biological Unit Coordinates (2m17.pdb1.gz) 26 Kb
  • LPC: Ligand-Protein Contacts for 2M17
  • CSU: Contacts of Structural Units for 2M17
  • Original NMR restraints for 2M17 from PDB
  • Retrieve 2M17 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2M17 from S2C, [Save to disk]
    • View 2M17 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2M17
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2M17, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2m17] [2m17_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2M17: [UBQ ] by SMART
    • Other resources with information on 2M17
  • Community annotation for 2M17 at PDBWiki (http://pdbwiki.org)

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