2M1X Immune System date Dec 07, 2012
title Ticam-1 Tir Domain Structure
authors Y.Enokizono, H.Kumeta, K.Funami, M.Horiuchi, J.Sarmiento, K.Yamas D.M.Standley, M.Matsumoto, T.Seya, F.Inagaki
compound source
Molecule: Tir Domain-Containing Adapter Molecule 1
Chain: A
Fragment: Unp Residues 387-545
Synonym: Ticam-1, Proline-Rich, Vinculin And Tir Domain-Con Protein B, Putative Nf-Kappa-B-Activating Protein 502h, Tol Interleukin-1 Receptor Domain-Containing Adapter Protein In Interferon Beta, Tir Domain-Containing Adapter Protein Indu Beta;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ticam1, Prvtirb, Trif
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Vector
Expression_system_vector: Pet22b, Pg-Tf2
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructures and interface mapping of the TIR domain-containing adaptor molecules involved in interferon signaling., Enokizono Y, Kumeta H, Funami K, Horiuchi M, Sarmiento J, Yamashita K, Standley DM, Matsumoto M, Seya T, Inagaki F, Proc Natl Acad Sci U S A. 2013 Dec 3;110(49):19908-13. doi:, 10.1073/pnas.1222811110. Epub 2013 Nov 19. PMID:24255114
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (900 Kb) [Save to disk]
  • Biological Unit Coordinates (2m1x.pdb1.gz) 46 Kb
  • CSU: Contacts of Structural Units for 2M1X
  • Original NMR restraints for 2M1X from PDB
  • Retrieve 2M1X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2M1X from S2C, [Save to disk]
  • View 2M1X in 3D
  • Proteopedia, because life has more than 2D.
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  • Visual 3D analysis of 2M1X
  • Cartoon representation from PDB Cartoon
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  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2M1X, from MSDmotif at EBI
  • Fold representative 2m1x from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2m1x] [2m1x_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2M1X
  • Community annotation for 2M1X at PDBWiki (http://pdbwiki.org)

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