2M32 Alpha-1 integrin I-domain in complex with GLOGEN triple helical peptide date
authors Chin, Y., Headey, S., Mohanty, B., McEwan, P., Swarbrick, J., Mulhern, T., Emsley, J., Simpson, J., Scanlon, M.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ACE, HYP, MG, NH2 enzyme
Primary referenceThe structure of integrin alpha1I domain in complex with a collagen-mimetic peptide., Chin YK, Headey SJ, Mohanty B, Patil R, McEwan PA, Swarbrick JD, Mulhern TD, Emsley J, Simpson JS, Scanlon MJ, J Biol Chem. 2013 Dec 27;288(52):36796-809. doi: 10.1074/jbc.M113.480251. Epub, 2013 Nov 1. PMID:24187131
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (709 Kb) [Save to disk]
  • Biological Unit Coordinates (2m32.pdb1.gz) 72 Kb
  • LPC: Ligand-Protein Contacts for 2M32
  • CSU: Contacts of Structural Units for 2M32
  • Original NMR restraints for 2M32 from PDB
  • Retrieve 2M32 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2M32 from S2C, [Save to disk]
    • View 2M32 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2M32
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2M32, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2m32_B] [2m32_D] [2m32] [2m32_C] [2m32_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2M32: [VWA ] by SMART
    • Other resources with information on 2M32
  • Community annotation for 2M32 at PDBWiki (http://pdbwiki.org)

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