2M3X Solution structure of Ph1500: a homohexameric protein centered on a 12-bladed beta-propeller date
authors Varnay, I., Truffault, V., Kessler, H., Coles, M.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceOptimized measurement temperature gives access to the solution structure of a 49 kDa homohexameric beta-propeller., Varnay I, Truffault V, Djuranovic S, Ursinus A, Coles M, Kessler H, J Am Chem Soc. 2010 Nov 10;132(44):15692-8. doi: 10.1021/ja1064608. PMID:20961124
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (4976 Kb) [Save to disk]
  • Biological Unit Coordinates (2m3x.pdb1.gz) 285 Kb
  • CSU: Contacts of Structural Units for 2M3X
  • Original NMR restraints for 2M3X from PDB
  • Retrieve 2M3X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2M3X from S2C, [Save to disk]
  • View 2M3X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2M3X
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2M3X, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2m3x] [2m3x_E] [2m3x_B] [2m3x_D] [2m3x_C] [2m3x_A] [2m3x_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2M3X: [CDC48_2 ] by SMART
  • Other resources with information on 2M3X
  • Community annotation for 2M3X at PDBWiki (http://pdbwiki.org)

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