2M41 Solution Structure of the AXH domain of Ataxin-1 in complex with ligand peptide from Capicua date
authors Chiara, C.de., Kelly, G., Pastore, A.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceProtein-protein interactions as a strategy towards protein-specific drug design: the example of ataxin-1., de Chiara C, Menon RP, Kelly G, Pastore A, PLoS One. 2013 Oct 14;8(10):e76456. doi: 10.1371/journal.pone.0076456. PMID:24155902
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (520 Kb) [Save to disk]
  • Biological Unit Coordinates (2m41.pdb1.gz) 35 Kb
  • CSU: Contacts of Structural Units for 2M41
  • Original NMR restraints for 2M41 from PDB
  • Retrieve 2M41 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2M41 from S2C, [Save to disk]
  • View 2M41 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2M41
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2M41, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2m41_A] [2m41_B] [2m41]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2M41: [AXH ] by SMART
  • Other resources with information on 2M41
  • Community annotation for 2M41 at PDBWiki (http://pdbwiki.org)

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