2M5V	Three-dimensional structure of human NLRP10/PYNOD pyrin domain	date
authors	Su, M.Y., Chang, C.F., Chang, C.I.
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Primary reference	Three-Dimensional Structure of Human NLRP10/PYNOD Pyrin Domain Reveals a Homotypic Interaction Site Distinct from Its Mouse Homologue., Su MY, Kuo CI, Chang CF, Chang CI, PLoS One. 2013 Jul 4;8(7):e67843. doi: 10.1371/journal.pone.0067843. Print 2013. PMID:23861819

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (637 Kb) [Save to disk] Biological Unit Coordinates (2m5v.pdb1.gz) 33 Kb CSU: Contacts of Structural Units for 2M5V Original NMR restraints for 2M5V from PDB Retrieve 2M5V in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2M5V from S2C, [Save to disk]

View 2M5V in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2M5V

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2M5V, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2m5v_A] [2m5v] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 2M5V: [PYRIN ] by SMART

Other resources with information on 2M5V

Community annotation for 2M5V at PDBWiki (http://pdbwiki.org)

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