2M6I Membrane Protein date Mar 29, 2013
title Putative Pentameric Open-Channel Structure Of Full-Length Transmembrane Domains Of Human Glycine Receptor Alpha1 Subu
authors D.Mowrey, T.Cui, Y.Jia, D.Ma, A.M.Makhov, P.Zhang, P.Tang, Y.Xu
compound source
Molecule: Full-Length Transmembrane Domains Of Human Glycin Alpha1 Subunit;
Chain: A, B, C, D, E
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-31b(+)
methodSolution NMR
subcellular loc. Membrane localization by OPM: Eukaryotic plasma membrane
extracellular side
cytoplasmic side
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, E, B


Primary referenceOpen-Channel Structures of the Human Glycine Receptor alpha1 Full-Length Transmembrane Domain., Mowrey DD, Cui T, Jia Y, Ma D, Makhov AM, Zhang P, Tang P, Xu Y, Structure. 2013 Aug 28. pii: S0969-2126(13)00264-5. doi:, 10.1016/j.str.2013.07.014. PMID:23994010
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (3632 Kb) [Save to disk]
  • Biological Unit Coordinates (2m6i.pdb1.gz) 243 Kb
  • CSU: Contacts of Structural Units for 2M6I
  • Original NMR restraints for 2M6I from PDB
  • Retrieve 2M6I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2M6I from S2C, [Save to disk]
  • View 2M6I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2M6I
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2M6I, from MSDmotif at EBI
  • Fold representative 2m6i from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2m6i_B] [2m6i_E] [2m6i_D] [2m6i_A] [2m6i_C] [2m6i]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2M6I
  • Community annotation for 2M6I at PDBWiki (http://pdbwiki.org)

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