2M8D Structure of SRSF1 RRM2 in complex with the RNA 5'-UGAAGGAC-3' date
authors Clery, A., Sinha, R., Anczukow, O., Corrionero, A., Moursy, A., Daubner, G., Valcarcel, J., Krainer, A.R., Allain, F.H.T.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceIsolated pseudo-RNA-recognition motifs of SR proteins can regulate splicing using a noncanonical mode of RNA recognition., Clery A, Sinha R, Anczukow O, Corrionero A, Moursy A, Daubner GM, Valcarcel J, Krainer AR, Allain FH, Proc Natl Acad Sci U S A. 2013 Jul 23;110(30):E2802-11. doi:, 10.1073/pnas.1303445110. Epub 2013 Jul 8. PMID:23836656
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (449 Kb) [Save to disk]
  • Biological Unit Coordinates (2m8d.pdb1.gz) 29 Kb
  • CSU: Contacts of Structural Units for 2M8D
  • Original NMR restraints for 2M8D from PDB
  • Retrieve 2M8D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2M8D from S2C, [Save to disk]
  • View 2M8D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2M8D
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2M8D, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2m8d_B] [2m8d_A] [2m8d]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2M8D: [RRM ] by SMART
  • Other resources with information on 2M8D
  • Community annotation for 2M8D at PDBWiki (http://pdbwiki.org)

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